BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB022D11SP1|AL427901
(1027 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig199 1562 0.0
>3x_Contig199
Length = 1194
Score = 1562 bits (783), Expect = 0.0
Identities = 812/827 (98%), Gaps = 1/827 (0%)
Strand = Plus / Minus
Query: 1 gatccatggcttgtaaatcggcctgtggattccaatcggaatcatagagtacaacagtat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 827 gatccatggcttgtaaatcggcctgtggattccaatcggaatcatagagtacaacagtat 768
Query: 61 cggctgtcactaagttaatacccaatcctccagcacgagtagtaagttaaanaataaatt 120
||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||
Sbjct: 767 cggctgtcactaagttaatacccaatcctccagcacgagtagtaagtaaaaaaataaatt 708
Query: 121 tttccgaatttggtttattatactcatcaatagcttcaactctttcatcatgcgaagttg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 707 tttccgaatttggtttattatactcatcaatagcttcaactctttcatcatgcgaagttg 648
Query: 181 agccatcaattctgcagtattcatatcccctgadataacagtdatcttctaaratatcta 240
||||||||||||||||||||||||||||||||| |||||||| ||||||||| |||||||
Sbjct: 647 agccatcaattctgcagtattcatatcccctgaaataacagtaatcttctaaaatatcta 588
Query: 241 gcaaccgtgacatttgtgaaaatataaggrctctcgagccttgttcctttttctttttta 300
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 587 gcaaccgtgacatttgtgaaaatataaggactctcgagccttgttcctttttctttttta 528
Query: 301 gcaatttatcaagtacaatcatttttcccgaattgaagactaaatgttcatctgtagtat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 527 gcaatttatcaagtacaatcatttttcccgaattgaagactaaatgttcatctgtagtat 468
Query: 361 aaggrgggccaggttctgctccttcgaaaaggtatggrtgattgcnacactttctcaact 420
|||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||
Sbjct: 467 aaggagggccaggttctgctccttcgaaaaggtatggatgattgcaacactttctcaact 408
Query: 421 gcataacaatatttdataatcttgttttaccttctcgcttaccgacggctccatttacgg 480
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 407 gcataacaatatttaataatcttgttttaccttctcgcttaccgacggctccatttacgg 348
Query: 481 catcgatgtctttctccaatagtgatttgtaccattctatttgcatgtccgtcatcccta 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 catcgatgtctttctccaatagtgatttgtaccattctatttgcatgtccgtcatcccta 288
Query: 541 cgtatagattaatctctttcttcggaagtgatgatttttcgacctcagatttcactcttc 600
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 287 cgtatagattaatctctttcttcggaagtaatgatttttcgacctcagatttcactcttc 228
Query: 601 taagtgaaaaaggttgtaaaaccgaatgaagttgctgaacaacaacctcttgatcttctt 660
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 227 taagtaaaaaaggttgtaaaaccgaatgaagttgctgaacaacaacctcttgatcttctt 168
Query: 661 cctttccgttttgttggaaccattcatcaaatacttctgagtcaccaaagacatcaggta 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 167 cctttccgttttgttggaaccattcatcaaatacttctgagtcaccaaagacatcaggta 108
Query: 721 gtaagawattcaaaagagcccaaagttcatgcaaattgttctgtagaggtgtaccagtga 780
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 107 gtaagaaattcaaaagagcccaaagttcatgcaaattgttctgtagaggtgtaccagtga 48
Query: 781 ttaagagacgatttttggagtwaaacagtcttatca-cctgtgacaa 826
||||||||||||||||||||| |||||||||||||| ||||||||||
Sbjct: 47 ttaagagacgatttttggagtaaaacagtcttatcaccctgtgacaa 1
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7706
Number of Sequences: 1807
Number of extensions: 7706
Number of successful extensions: 62
Number of sequences better than 1.0e-20: 1
length of query: 1027
length of database: 10,358,551
effective HSP length: 16
effective length of query: 1011
effective length of database: 10,329,639
effective search space: 10443265029
effective search space used: 10443265029
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.2 bits)